Identifiers and Description
Gene Model Identifier
Contig13116.g13984Standard Name
HIS38 (Macronuclear gene encoding histone variant H3.8)Aliases
H3.8 | mdp64 | protein_XDescription
histone variant H3.8Genome Browser
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Gene Ontology Annotations
Molecular Function
- JUN kinase activity (IEA) | GO:0004705
- basal transcription machinery binding (IEA) | GO:0001098
- secondary active cyanate transmembrane transporter activity (IEA) | GO:0015541
- D-galactose 6-phosphate 1-epimerase activity (IEA) | GO:0102541
- alcohol dehydrogenase (NADP+) activity (IEA) | GO:0008106
Biological Process
- reproduction (IEA) | GO:0000003
- positive regulation of semaphorin-plexin signaling pathway (IEA) | GO:2001262
- regulation of C-C chemokine binding (IEA) | GO:2001263
- negative regulation of B cell mediated immunity (IEA) | GO:0002713
- purine nucleotide interconversion (IEA) | GO:0015950
Domains
No Data fetched for Domains
Gene Expression Profile
No expression data available at this time.
Homologs
No Data fetched for Homologs
General Information
Paragraph No Gene Name Paragraph Text 10 HIS38 Histone gene HIS38 encoding histone variant H3.8, formerly mdp64 (before 2013). Renamed with respect to: Talbert PB et al. A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7. PubMed PMID: 22650316; PubMed Central PMCID: PMC3380720. 11 HIS38 Possibly indentical to protein X (Schlegel et al (1990) Transcriptionally inactive micronuclei, macronuclear anlagen and transcriptionally active macronuclei differ in histone composition in the hypotrichous ciliateStylonychia lemnae. Chromosoma 99(6) 401-406.)
Associated Literature
- Ref:24502432: Forcob S, Bulic A, Jönsson F, Lipps HJ, Postberg J (2014) Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development. Epigenetics & chromatin 7(1):4
Sequences
>Contig13116.g13984(protein)
MPRQKLAGKKMKSSTKKSVASGSKASKSTMKKKTAPAEGGIKTHNRRFKPGTVALREIKR
YQKVTNLLLLKAPFQRFVRAICEGIDAQLRFQSQALLAVQEAAEMYLVGLFEDSNLCAIH
ANRVTVMKKDMELARRIRGERFHDHRDLQPKNGDEVFYQLPYYNEKEQMAHLKKVIGRN>Contig13116.g13984(coding)
atgcccagacaaaagctcgccggtaagaagatgaagtcctcaaccaagaagagtgttgcc
tcaggctccaaggccagcaagtcaaccatgaaaaagaagactgctccagctgagggaggt
atcaagacccacaacagaagattcaagccaggtaccgtcgctctcagagagatcaagaga
tactagaaggtcaccaacctcctcctcctcaaggctcccttccagagattcgtcagagcc
atctgcgaaggaatcgacgcccaactcagattctagtcacaagccctcctcgccgtccaa
gaagctgctgagatgtacttggtcggacttttcgaagactccaacttgtgcgccattcac
gccaacagagtgactgtcatgaagaaggacatggagctcgccagaagaatcagaggagag
agattccacgaccacagagacctccaacccaagaatggggatgaagttttctaccagttg
ccctactacaacgagaaggagcagatggctcacctcaagaaagttatcggcagaaactga