Identifiers and Description

Gene Model Identifier

Contig3614.g3856

Standard Name

HIS35 (Macronuclear gene encoding histone variant H3.5)

Aliases

H3.5 | H3v1

Description

histone variant H3.5

Genome Browser

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• alcohol dehydrogenase (NADP+) activity (IEA) | GO:0008106
• basal transcription machinery binding (IEA) | GO:0001098
• D-galactose 6-phosphate 1-epimerase activity (IEA) | GO:0102541
• JUN kinase activity (IEA) | GO:0004705

Biological Process

• intracellular accumulation of glycerol (IEA) | GO:0006973
• regulation of glucokinase activity (IEA) | GO:0033131

Domains

No Data fetched for Domains

Homologs

No Data fetched for Homologs

General Information

No.	Gene Name(s)	Paragraph Text
155	HIS35	Histone gene HIS35 encoding histone variant H3.5, formerly H3v1 (before 2013). Renamed with respect to: Talbert PB et al. A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7. PubMed PMID: 22650316; PubMed Central PMCID: PMC3380720.

Associated Literature

1. Ref:24502432: Forcob S, Bulic A, Jönsson F, Lipps HJ, Postberg J (2014) Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development. Epigenetics & chromatin 7(1):4

Sequences

>Contig3614.g3856(coding)
atggcaagaaccaagtagactgctagaaagaacactggtgctaaagctccaagaaagcaa
ctcgctaacaaggccgcaaggaagactgcctaagtagcctagagtggcggagtcaagaag
ccacacagattcagaccaggaaccgtcgccctcagagaaatcagaaaattccagaagtca
acagagcttttgatcagaaagctgccattccagagacttgtgagagaaatcgcctaggag
tacaaaagcgatctcagattccaaagccaggctgtattggctctgcaagaagctgctgaa
gcttacatggtaggactgtttgaggacaccaacctttgtgccattcacgccaagagagtc
accatcatgcctaaggacattcaactcgccagaagaatcagaggagaaagatcatga

>Contig3614.g3856(protein)
MARTKQTARKNTGAKAPRKQLANKAARKTAQVAQSGGVKKPHRFRPGTVALREIRKFQKS
TELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRV
TIMPKDIQLARRIRGERS