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Identifiers and Description
Gene Model Identifier
Contig3614.g3856Standard Name
HIS35 (Macronuclear gene encoding histone variant H3.5)Aliases
H3.5 | H3v1Description
histone variant H3.5Genome Browser
Gene Ontology Annotations
Molecular Function
- alcohol dehydrogenase (NADP+) activity (IEA) | GO:0008106
- basal transcription machinery binding (IEA) | GO:0001098
- JUN kinase activity (IEA) | GO:0004705
- obsolete D-galactose 6-phosphate 1-epimerase activity (IEA) | GO:0102541
Biological Process
- intracellular accumulation of glycerol (IEA) | GO:0006973
- regulation of glucokinase activity (IEA) | GO:0033131
Domains
No Data fetched for Domains
Homologs
No Data fetched for Homologs
General Information
No.
Gene Name(s)
Paragraph Text
155
HIS35
Histone gene HIS35 encoding histone variant H3.5, formerly H3v1 (before 2013). Renamed with respect to: Talbert PB et al. A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7. PubMed PMID: 22650316; PubMed Central PMCID: PMC3380720.
Associated Literature
- Ref:24502432: Forcob S, Bulic A, Jönsson F, Lipps HJ, Postberg J (2014) Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development. Epigenetics & chromatin 7(1):4
Sequences
>Contig3614.g3856(coding)
atggcaagaaccaagtagactgctagaaagaacactggtgctaaagctccaagaaagcaa
ctcgctaacaaggccgcaaggaagactgcctaagtagcctagagtggcggagtcaagaag
ccacacagattcagaccaggaaccgtcgccctcagagaaatcagaaaattccagaagtca
acagagcttttgatcagaaagctgccattccagagacttgtgagagaaatcgcctaggag
tacaaaagcgatctcagattccaaagccaggctgtattggctctgcaagaagctgctgaa
gcttacatggtaggactgtttgaggacaccaacctttgtgccattcacgccaagagagtc
accatcatgcctaaggacattcaactcgccagaagaatcagaggagaaagatcatga
>Contig3614.g3856(protein)
MARTKQTARKNTGAKAPRKQLANKAARKTAQVAQSGGVKKPHRFRPGTVALREIRKFQKS
TELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRV
TIMPKDIQLARRIRGERS
Gene Ontology Annotations
Molecular Function
- alcohol dehydrogenase (NADP+) activity (IEA) | GO:0008106
- basal transcription machinery binding (IEA) | GO:0001098
- JUN kinase activity (IEA) | GO:0004705
- obsolete D-galactose 6-phosphate 1-epimerase activity (IEA) | GO:0102541
Biological Process
- intracellular accumulation of glycerol (IEA) | GO:0006973
- regulation of glucokinase activity (IEA) | GO:0033131
Domains
Homologs
General Information
| No. | Gene Name(s) | Paragraph Text |
| 155 | HIS35 | Histone gene HIS35 encoding histone variant H3.5, formerly H3v1 (before 2013). Renamed with respect to: Talbert PB et al. A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7. PubMed PMID: 22650316; PubMed Central PMCID: PMC3380720. |
Associated Literature
- Ref:24502432: Forcob S, Bulic A, Jönsson F, Lipps HJ, Postberg J (2014) Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development. Epigenetics & chromatin 7(1):4
Sequences
>Contig3614.g3856(coding)
atggcaagaaccaagtagactgctagaaagaacactggtgctaaagctccaagaaagcaa
ctcgctaacaaggccgcaaggaagactgcctaagtagcctagagtggcggagtcaagaag
ccacacagattcagaccaggaaccgtcgccctcagagaaatcagaaaattccagaagtca
acagagcttttgatcagaaagctgccattccagagacttgtgagagaaatcgcctaggag
tacaaaagcgatctcagattccaaagccaggctgtattggctctgcaagaagctgctgaa
gcttacatggtaggactgtttgaggacaccaacctttgtgccattcacgccaagagagtc
accatcatgcctaaggacattcaactcgccagaagaatcagaggagaaagatcatga
>Contig3614.g3856(protein)
MARTKQTARKNTGAKAPRKQLANKAARKTAQVAQSGGVKKPHRFRPGTVALREIRKFQKS
TELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRV
TIMPKDIQLARRIRGERS
