StyloDB | Stylonychia Genome Database Wiki

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SET5

Postberg Updated Gene Info

SET4

Postberg Updated Gene Info

SET3

Postberg Updated Gene Info

Recent Papers

Omar A, Yeo JH, Jung JH (2022) A new "flagship" ciliate, Pseudostylonychia obliquocaudata n. gen., n. sp. (Ciliophora, Hypotricha), from South Korea. European journal of protistology 84:125893
PUBMED:35569184

Drews F, Boenigk J, Simon M (2022) Paramecium epigenetics in development and proliferation. The Journal of eukaryotic microbiology 69:e12914
PUBMED:35363910

Wang Y, Yao L, Fan J, Zhao X, Zhang Q, Chen Y, Guo C (2022) The Codon Usage Bias Analysis of Free-Living Ciliates' Macronuclear Genomes and Clustered Regularly Interspaced Short Palindromic Repeats/Cas9 Vector Construction of . Frontiers in microbiology 13:785889
PUBMED:35308388

BLAST Server at StyloDB

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Database

Stylonychia lemnae Amino Acid (protein)
Stylonychia lemnae CDS (nucleotide)
Stylonychia lemnae Assembly (nucleotide)

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium
Lipps Lab

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.